CDS

Accession Number TCMCG007C11968
gbkey CDS
Protein Id XP_009126769.1
Location complement(join(5672009..5672237,5672333..5672428,5672521..5672645,5672809..5672961,5673041..5673367,5673903..5674223))
Gene LOC103851650
GeneID 103851650
Organism Brassica rapa

Protein

Length 416aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009128521.3
Definition histone-binding protein MSI1-like [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category B
Description msi1, mee70, atmsi1 msi1 (multicopy supressor of ira1)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K10752        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04218        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005677        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006349        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010214        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017053        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0031507        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071514        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090568        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000653        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGAGACGACGAGGAGACGCAAGAAGAGATCAAGGAGCGACTGATCAACGAAGAGTACAAGACCTGGAAGAGGAACACTCCTTTCCTCTACGATCTCGTCATCAGCCACCTCCTTGAGTGGCCTTCCCTTACTGTCGAGTGGCTCCCCGACCGCGAGGAGCCTTCCGGGAAAAACTACTCCGTTCAGAAGATGATTCTCGGCACCCACACCCACGTGAACGAGGCTAATTACCTCATGCTGGCTCAGGTTCAGCTTCCCCTTGCCGACGCCGAGTACAACGATGAGAGGGCCAAGTTTGGTTCCGCCACCGGCAAGGTGCAAGTTATTAAGAAAATAAATCACGAAGGGGAGATGAACCGAGCTCGCTACATGCCTCAGAACCCTTTCATGATTGCTACCAAGACGGTTCGTGGGGAGGTGTATGTGTTTGATTACAGCAAGCACCCTTCTAAGCCAGCGCTTGATGGTGCTTGCAACCCTGATCTGAGGCTCAGAGGTCACAGCTCTGAAGGGTATGGCCTGTCTTGGAGTACGCTCAAGCAGGGTCATTTGCTCAGCGGCGCTAATGACGCTCAGATCTGCTTGTGGGATATTAACGCCTCTCCTAAGAACAAGACTCTTGACGCTCACCAGATCTTTAAGGCTCATGAAGGCGCTGTGGAAGATGTTGCATGGCATCTGAGGCATGAATACCTGTTTGGATCCGTTGGAGAGGATCAGTATTTTTTTATATGGGATCTGCGTTCTCCGTCTGCCAGTAAACCAGTACAGTCTGTGGCTGCTCACTCCAGGGAGGTTAACTGCTTAGCCTTCAATCCACTTAATGAGTGGATTGTGGCAACAGGGTCAACTGATAAGACTGTTAAAGTATTCGATCTACGGAGGCTAAGCAGTGCTCTTCACTCACTTGATGGCCATATAGAGGAGGTTTTCCAAGTTGGTTGGAGCCCGAAGAACGAGTCTATCGTAGCCTCAAGTTGCCTCGGTAGAAGAATTATGGTTTGGGATATTAACAAGATTGATGAGGAGCAGACAGCAGAGGCTGCGGAGGACGGCCCACCAGAGCTGCTGTTTACACATGGTGGTCACACCGCCAGAATTTCAGATTTCTCATGGAACCCTTGTGACGATTGGGTAATTTCCAGTGTATGTGAGGACAACATACTCCAAATATGGCAAATGGCTGAGACCATATATCATGGTGAGGATGATGCTCCAGGGGAAGAACCATTAAGAGGTTCCTAG
Protein:  
MARDDEETQEEIKERLINEEYKTWKRNTPFLYDLVISHLLEWPSLTVEWLPDREEPSGKNYSVQKMILGTHTHVNEANYLMLAQVQLPLADAEYNDERAKFGSATGKVQVIKKINHEGEMNRARYMPQNPFMIATKTVRGEVYVFDYSKHPSKPALDGACNPDLRLRGHSSEGYGLSWSTLKQGHLLSGANDAQICLWDINASPKNKTLDAHQIFKAHEGAVEDVAWHLRHEYLFGSVGEDQYFFIWDLRSPSASKPVQSVAAHSREVNCLAFNPLNEWIVATGSTDKTVKVFDLRRLSSALHSLDGHIEEVFQVGWSPKNESIVASSCLGRRIMVWDINKIDEEQTAEAAEDGPPELLFTHGGHTARISDFSWNPCDDWVISSVCEDNILQIWQMAETIYHGEDDAPGEEPLRGS